SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB44983

Signal sequence   MSRVFSCVLRACVCAGLCCWVCMG

Length  24

Organism  Human herpesvirus 6B (strain Z29) (HHV-6 variant B) (Human B lymphotropic virus)

UniProt ID  Q9PX32,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB44983.cif

Structure  SPKB44983.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2598.26504

Aliphatic index  89.16666667

Isoelectric point  8.115710179

Charge (pH=7)   1.626129381

Topological polar surface area  912.67

Aromaticity  0.083333333

Average rotatable bonds  3.375

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  37

X logP energy  -7.86966

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.