SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB44815

Signal sequence   MSGVLSCVLRACACAGLCCWVCMG

Length  24

Organism  Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus)

UniProt ID  Q89660,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB44815.cif

Structure  SPKB44815.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2437.05844

Aliphatic index  97.5

Isoelectric point  7.735177725

Charge (pH=7)   0.626132693

Topological polar surface area  850.77

Aromaticity  0.041666667

Average rotatable bonds  3.166666667

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  36

X logP energy  -8.33423

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.