SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB44671

Signal sequence   MSGKAIFVVIIAIVLLLLIGSLIG

Length  24

Organism  Acanthamoeba polyphaga mimivirus (APMV)

UniProt ID  Q5UPR5,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB44671.cif

Structure  SPKB44671.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2454.17944

Aliphatic index  223.3333333

Isoelectric point  9.700002532

Charge (pH=7)   0.997689266

Topological polar surface area  799.1

Aromaticity  0.041666667

Average rotatable bonds  3.458333333

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  29

X logP energy  0.0672

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.