SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB44398

Signal sequence   MQLSSSLRSARSAAASSGCALASRPVVA

Length  28

Organism  Chlamydomonas reinhardtii (Chlamydomonas smithii)

UniProt ID  Q08355,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB44398.cif

Structure  SPKB44398.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2735.12904

Aliphatic index  87.5

Isoelectric point  12.19926402

Charge (pH=7)   2.93599965

Topological polar surface area  1230.86

Aromaticity  0

Average rotatable bonds  3.178571429

Number of hydrogen bond donors  47

Number of hydrogen bond acceptors  43

X logP energy  -20.10829

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.