SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB44298

Signal sequence   MLMLLCIIATVIPFSLVEG

Length  19

Organism  Ruditapes philippinarum (Japanese carpet shell) (Venerupis philippinarum)

UniProt ID  P86984,

Motif  1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB44298.cif

Structure  SPKB44298.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2063.64304

Aliphatic index  179.4736842

Isoelectric point  3.849962145

Charge (pH=7)   -1.062215294

Topological polar surface area  656.09

Aromaticity  0.052631579

Average rotatable bonds  3.473684211

Number of hydrogen bond donors  23

Number of hydrogen bond acceptors  26

X logP energy  -0.1665

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.