SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB44297

Signal sequence   MHQSSLGVLVLFSLIYLCIS

Length  20

Organism  Ruditapes philippinarum (Japanese carpet shell) (Venerupis philippinarum)

UniProt ID  P86983,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB44297.cif

Structure  SPKB44297.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2223.71674

Aliphatic index  165.5

Isoelectric point  7.355498302

Charge (pH=7)   0.02606826

Topological polar surface area  789.14

Aromaticity  0.1

Average rotatable bonds  3.6

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  30

X logP energy  -4.05

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.