SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB44173

Signal sequence   MSRNDARYLRCTAALGAAFFACGAAA

Length  26

Organism  Sinorhizobium fredii (strain NBRC 101917 / NGR234)

UniProt ID  P55561,

Motif  1..26



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB44173.cif

Structure  SPKB44173.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2679.08464

Aliphatic index  64.61538462

Isoelectric point  8.803748473

Charge (pH=7)   1.873621004

Topological polar surface area  1117.6

Aromaticity  0.115384615

Average rotatable bonds  3.230769231

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  38

X logP energy  -13.38819

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.