SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB44130

Signal sequence   MRTMHCFLFILLFCLGQVFT

Length  20

Organism  Caenorhabditis elegans

UniProt ID  P46504,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB44130.cif

Structure  SPKB44130.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2421.03544

Aliphatic index  112

Isoelectric point  8.242951845

Charge (pH=7)   0.964940647

Topological polar surface area  790.35

Aromaticity  0.2

Average rotatable bonds  3.85

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  30

X logP energy  -1.27983

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.