SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB44020

Signal sequence   MSSIRFIACLYLISIFGNCHE

Length  21

Organism  Vaccinia virus (strain Copenhagen) (VACV)

UniProt ID  P21041,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB44020.cif

Structure  SPKB44020.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2417.88424

Aliphatic index  116.1904762

Isoelectric point  7.252002473

Charge (pH=7)   -0.034134644

Topological polar surface area  897.21

Aromaticity  0.142857143

Average rotatable bonds  3.714285714

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  33

X logP energy  -5.98523

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.