SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB44016

Signal sequence   MFSFIMKAAILLILVGCISFCISS

Length  24

Organism  Apostichopus parvimensis (Warty sea cucumber) (Stichopus parvimensis)

UniProt ID  P19477,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB44016.cif

Structure  SPKB44016.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2608.31204

Aliphatic index  150.4166667

Isoelectric point  8.229691165

Charge (pH=7)   0.873739834

Topological polar surface area  839.56

Aromaticity  0.125

Average rotatable bonds  3.583333333

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  34

X logP energy  -2.5632

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.