SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43872

Signal sequence   GNTYS

Length  5

Organism  Trichostrongylus colubriformis (Black scour worm)

UniProt ID  O97391,

Motif  <1..5



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43872.cif

Structure  SPKB43872.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  540.53024

Aliphatic index  0

Isoelectric point  6.093198033

Charge (pH=7)   -0.002866115

Topological polar surface area  283.5

Aromaticity  0.2

Average rotatable bonds  3

Number of hydrogen bond donors  10

Number of hydrogen bond acceptors  10

X logP energy  -4.8343

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.