SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43859

Signal sequence   MKFCRGWRGARAGQFARLLCVCWCSLGA

Length  28

Organism  Treponema pallidum (strain Nichols)

UniProt ID  O83908,

Motif  1..28



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43859.cif

Structure  SPKB43859.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3147.80924

Aliphatic index  66.42857143

Isoelectric point  10.0174741

Charge (pH=7)   4.749777157

Topological polar surface area  1217.54

Aromaticity  0.142857143

Average rotatable bonds  3.607142857

Number of hydrogen bond donors  50

Number of hydrogen bond acceptors  41

X logP energy  -10.26702

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.