SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43840

Signal sequence   MYAGGRVVRSAFARGKV

Length  17

Organism  Treponema pallidum (strain Nichols)

UniProt ID  O83516,

Motif  1..17



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43840.cif

Structure  SPKB43840.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1825.16514

Aliphatic index  68.82352941

Isoelectric point  12.22713629

Charge (pH=7)   3.996828917

Topological polar surface area  781.1

Aromaticity  0.117647059

Average rotatable bonds  3.529411765

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  25

X logP energy  -8.06779

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.