SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43788

Signal sequence   MAKSIIIQAPALCFLSLLGFAYS

Length  23

Organism  Betula pendula (European white birch) (Betula verrucosa)

UniProt ID  O49813,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43788.cif

Structure  SPKB43788.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2458.01484

Aliphatic index  136.0869565

Isoelectric point  8.522939048

Charge (pH=7)   0.934864135

Topological polar surface area  844.76

Aromaticity  0.130434783

Average rotatable bonds  3.391304348

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  32

X logP energy  -3.9082

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.