SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43646

Signal sequence   MNLEQLINVLGLLVWIAARAVS

Length  22

Organism  Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5)

UniProt ID  F5HEF3,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43646.cif

Structure  SPKB43646.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2423.94244

Aliphatic index  177.2727273

Isoelectric point  6.410149741

Charge (pH=7)   -0.000243889

Topological polar surface area  938.91

Aromaticity  0.045454545

Average rotatable bonds  3.636363636

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  30

X logP energy  -4.82533

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.