SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43629

Signal sequence   MNHYSFSSLIRAFIPLSLVIVSAAWQPAALA

Length  31

Organism  Pectobacterium carotovorum subsp. carotovorum (strain PC1)

UniProt ID  C6DH41,

Motif  1..31



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43629.cif

Structure  SPKB43629.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3374.99154

Aliphatic index  126.1290323

Isoelectric point  9.351184298

Charge (pH=7)   1.088039665

Topological polar surface area  1232.67

Aromaticity  0.129032258

Average rotatable bonds  3.290322581

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  43

X logP energy  -8.04893

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.