SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43620

Signal sequence   MNKKSLLVVLVIALAVVPFAAT

Length  22

Organism  Halorubrum pleomorphic virus 1 (HRPV-1)

UniProt ID  C1JJY5,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43620.cif

Structure  SPKB43620.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2297.91164

Aliphatic index  172.7272727

Isoelectric point  10.80537956

Charge (pH=7)   1.997394232

Topological polar surface area  801.22

Aromaticity  0.045454545

Average rotatable bonds  3.363636364

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  29

X logP energy  -2.8223

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.