SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43402

Signal sequence   MANFISFFILFSALFFLFKRLF

Length  22

Organism  Catharanthus roseus (Madagascar periwinkle) (Vinca rosea)

UniProt ID  W8JIS9,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43402.cif

Structure  SPKB43402.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2720.35644

Aliphatic index  115.4545455

Isoelectric point  11.65177567

Charge (pH=7)   1.997685954

Topological polar surface area  845.89

Aromaticity  0.363636364

Average rotatable bonds  3.909090909

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  29

X logP energy  1.84247

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.