SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43380

Signal sequence   MRLLLWVLLVTLVTFLSSGDA

Length  21

Organism  Phytophthora nicotianae (Potato buckeye rot agent) (Phytophthora parasitica)

UniProt ID  W2MBG9,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43380.cif

Structure  SPKB43380.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2347.88464

Aliphatic index  176.1904762

Isoelectric point  6.338718596

Charge (pH=7)   -0.001572528

Topological polar surface area  841.23

Aromaticity  0.095238095

Average rotatable bonds  3.571428571

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  29

X logP energy  -2.75973

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.