SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43246

Signal sequence   MINYRHIVFCLCVMVVVDS

Length  19

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9XID2,

Motif  1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43246.cif

Structure  SPKB43246.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2241.77104

Aliphatic index  137.8947368

Isoelectric point  7.251587979

Charge (pH=7)   -0.035463283

Topological polar surface area  798.55

Aromaticity  0.105263158

Average rotatable bonds  3.736842105

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  30

X logP energy  -3.32873

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.