SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43160

Signal sequence   MEKNKRAIGFLLLVVLINGVMMTRSNG

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9SK09,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43160.cif

Structure  SPKB43160.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3005.69174

Aliphatic index  122.5925926

Isoelectric point  11.65088967

Charge (pH=7)   2.999162732

Topological polar surface area  1202.79

Aromaticity  0.037037037

Average rotatable bonds  3.925925926

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  41

X logP energy  -9.68756

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.