SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43156

Signal sequence   MNRNQHKPMFVTFLINILLLQLLNLTNA

Length  28

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9SIZ6,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43156.cif

Structure  SPKB43156.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3311.00964

Aliphatic index  139.2857143

Isoelectric point  11.65178972

Charge (pH=7)   2.088595045

Topological polar surface area  1298.92

Aromaticity  0.071428571

Average rotatable bonds  3.964285714

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  43

X logP energy  -8.89583

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.