SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43154

Signal sequence   MSTSKAITLTLFITTTLLASCDAAANA

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9SIQ2,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43154.cif

Structure  SPKB43154.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2730.18414

Aliphatic index  108.8888889

Isoelectric point  6.160569088

Charge (pH=7)   -0.063838966

Topological polar surface area  1108.4

Aromaticity  0.037037037

Average rotatable bonds  3.259259259

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  42

X logP energy  -13.9345

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.