SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43152

Signal sequence   MSSPATTITFFFFFTLSSFFYITSS

Length  25

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9SII5,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43152.cif

Structure  SPKB43152.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2878.28844

Aliphatic index  50.8

Isoelectric point  6.093198033

Charge (pH=7)   -0.002866115

Topological polar surface area  995.69

Aromaticity  0.32

Average rotatable bonds  3.36

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  39

X logP energy  -8.044

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.