SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43146

Signal sequence   MATFIRFTAPLFCFFFLFSLFSHQTMS

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9SH40,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43146.cif

Structure  SPKB43146.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3238.87314

Aliphatic index  65.18518519

Isoelectric point  8.557478416

Charge (pH=7)   1.026915363

Topological polar surface area  1066.18

Aromaticity  0.296296296

Average rotatable bonds  3.62962963

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  40

X logP energy  -4.27503

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.