SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43089

Signal sequence   MRDRVAMMLRPLVRGWIPRAVLLLTVAFSFG

Length  31

Organism  Xylella fastidiosa (strain 9a5c)

UniProt ID  Q9PDX7,

Motif  1..31



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43089.cif

Structure  SPKB43089.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3573.42924

Aliphatic index  122.5806452

Isoelectric point  12.67612163

Charge (pH=7)   3.998414227

Topological polar surface area  1321.79

Aromaticity  0.096774194

Average rotatable bonds  3.677419355

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  43

X logP energy  -6.18935

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.