SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43088

Signal sequence   MPMFSRFRYIVFTVALLSGPVCA

Length  23

Organism  Xylella fastidiosa (strain 9a5c)

UniProt ID  Q9PDC7,

Motif  1..23



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43088.cif

Structure  SPKB43088.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2606.20044

Aliphatic index  97.39130435

Isoelectric point  9.49995979

Charge (pH=7)   1.935152547

Topological polar surface area  890.66

Aromaticity  0.173913043

Average rotatable bonds  3.391304348

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  33

X logP energy  -4.14186

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.