SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43050

Signal sequence   MSSSFIPKRIALVLNLAMVAIQVFFIRSVSS

Length  31

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9M2I5,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43050.cif

Structure  SPKB43050.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3426.18234

Aliphatic index  135.1612903

Isoelectric point  12.51647815

Charge (pH=7)   2.997682643

Topological polar surface area  1284.91

Aromaticity  0.096774194

Average rotatable bonds  3.64516129

Number of hydrogen bond donors  46

Number of hydrogen bond acceptors  45

X logP energy  -9.56056

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.