SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43034

Signal sequence   MSNNWKSVRLRLQNRTLVFLLVILSFGSCYS

Length  31

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LYN6,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43034.cif

Structure  SPKB43034.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3646.32934

Aliphatic index  116.1290323

Isoelectric point  11.43200981

Charge (pH=7)   3.934854201

Topological polar surface area  1477.8

Aromaticity  0.129032258

Average rotatable bonds  3.903225806

Number of hydrogen bond donors  55

Number of hydrogen bond acceptors  49

X logP energy  -13.14219

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.