SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43033

Signal sequence   MKDNLERAKLMVSSTVFSWLLLCLFAVTTS

Length  30

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LY84,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43033.cif

Structure  SPKB43033.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3405.08914

Aliphatic index  113.6666667

Isoelectric point  8.540430308

Charge (pH=7)   0.937637811

Topological polar surface area  1296.25

Aromaticity  0.1

Average rotatable bonds  3.766666667

Number of hydrogen bond donors  48

Number of hydrogen bond acceptors  47

X logP energy  -9.76493

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.