SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43021

Signal sequence   MVRNQSRCFLGIIITISFFFFLLSLPNTFA

Length  30

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LS80,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43021.cif

Structure  SPKB43021.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3497.21954

Aliphatic index  117

Isoelectric point  10.52640717

Charge (pH=7)   1.936002961

Topological polar surface area  1252.65

Aromaticity  0.2

Average rotatable bonds  3.7

Number of hydrogen bond donors  45

Number of hydrogen bond acceptors  43

X logP energy  -6.93976

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.