SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43020

Signal sequence   MIRSQSYCFLGITITIYFFFCLLPLPNTFA

Length  30

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LS79,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43020.cif

Structure  SPKB43020.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3521.25344

Aliphatic index  107.3333333

Isoelectric point  8.214515754

Charge (pH=7)   0.872330728

Topological polar surface area  1179.33

Aromaticity  0.233333333

Average rotatable bonds  3.533333333

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  44

X logP energy  -4.25603

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.