SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43013

Signal sequence   MSSSFVYKSLFLVPILAVVAMQLSFVQSVLS

Length  31

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LRL6,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43013.cif

Structure  SPKB43013.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3392.11544

Aliphatic index  138.0645161

Isoelectric point  9.298300651

Charge (pH=7)   0.996838851

Topological polar surface area  1201.57

Aromaticity  0.129032258

Average rotatable bonds  3.516129032

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  45

X logP energy  -7.5104

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.