SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43012

Signal sequence   MSLSSSVTKHLISASILAIVAMQLPSVHS

Length  29

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LRL4,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43012.cif

Structure  SPKB43012.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3008.58484

Aliphatic index  134.4827586

Isoelectric point  9.703982825

Charge (pH=7)   1.179507447

Topological polar surface area  1177.87

Aromaticity  0

Average rotatable bonds  3.413793103

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  45

X logP energy  -13.0192

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.