SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43005

Signal sequence   MYSSYSLFKCLVCFYILGIQVLIHSVSS

Length  28

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LRK5,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43005.cif

Structure  SPKB43005.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3201.84724

Aliphatic index  128.5714286

Isoelectric point  8.216664462

Charge (pH=7)   0.962097682

Topological polar surface area  1128.88

Aromaticity  0.178571429

Average rotatable bonds  3.642857143

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  44

X logP energy  -6.3329

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.