SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB43004

Signal sequence   MFSSYSLCKCLVSFHILAIQVLISCASS

Length  28

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LRK4,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB43004.cif

Structure  SPKB43004.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3051.68534

Aliphatic index  125.3571429

Isoelectric point  8.056199563

Charge (pH=7)   0.901823794

Topological polar surface area  1108.65

Aromaticity  0.107142857

Average rotatable bonds  3.535714286

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  44

X logP energy  -9.555

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.