SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42996

Signal sequence   MKIASLKLLLLVSLLFAVTQNGIS

Length  24

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LMX3,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42996.cif

Structure  SPKB42996.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2573.21614

Aliphatic index  178.75

Isoelectric point  10.80537956

Charge (pH=7)   1.997394232

Topological polar surface area  951.76

Aromaticity  0.041666667

Average rotatable bonds  3.708333333

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  34

X logP energy  -5.3008

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.