SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42995

Signal sequence   MAQSSGHVSYVAVTVPIAIVMTVLCLFL

Length  28

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LMU7,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42995.cif

Structure  SPKB42995.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2950.60604

Aliphatic index  142.5

Isoelectric point  7.355498302

Charge (pH=7)   0.02606826

Topological polar surface area  1033.38

Aromaticity  0.071428571

Average rotatable bonds  3.25

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  40

X logP energy  -6.5515

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.