SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42994

Signal sequence   MYRVYKNNKFILISIPRITNKLWQKNCNLVILLGVLLVLTLFHDPIIVA

Length  49

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LMS5,

Motif  1..49



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42994.cif

Structure  SPKB42994.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5753.08174

Aliphatic index  158.9795918

Isoelectric point  10.57629899

Charge (pH=7)   5.024477572

Topological polar surface area  2111.88

Aromaticity  0.102040816

Average rotatable bonds  3.87755102

Number of hydrogen bond donors  73

Number of hydrogen bond acceptors  71

X logP energy  -7.98166

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.