SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42990

Signal sequence   MSSNILAMVAMQLLLIRIVSS

Length  21

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LJW2,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42990.cif

Structure  SPKB42990.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2290.86644

Aliphatic index  167.1428571

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  874.32

Aromaticity  0

Average rotatable bonds  3.761904762

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  32

X logP energy  -6.59853

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.