SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42980

Signal sequence   MDLHLIGFLLWFFVVQVTTSSA

Length  22

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LH73,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42980.cif

Structure  SPKB42980.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2525.00334

Aliphatic index  132.7272727

Isoelectric point  5.292257586

Charge (pH=7)   -0.910660126

Topological polar surface area  880.2

Aromaticity  0.181818182

Average rotatable bonds  3.545454545

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  31

X logP energy  -2.9137

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.