SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42878

Signal sequence   MAVNFKFSLLTITIVVNILVYCNASAIKFDVDLEKVPSN

Length  39

Organism  Oplophorus gracilirostris (Luminous shrimp)

UniProt ID  Q9GV46,

Motif  1..39



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42878.cif

Structure  SPKB42878.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4331.15134

Aliphatic index  132.3076923

Isoelectric point  6.374491271

Charge (pH=7)   -0.063057841

Topological polar surface area  1644.03

Aromaticity  0.102564103

Average rotatable bonds  3.641025641

Number of hydrogen bond donors  56

Number of hydrogen bond acceptors  58

X logP energy  -11.508

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.