SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42870

Signal sequence   MAYNYRFAILLVLLSATVGFTAA

Length  23

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9FY71,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42870.cif

Structure  SPKB42870.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2506.00084

Aliphatic index  131.7391304

Isoelectric point  9.17162813

Charge (pH=7)   0.99628016

Topological polar surface area  909.66

Aromaticity  0.173913043

Average rotatable bonds  3.347826087

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  32

X logP energy  -4.63503

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.