SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42857

Signal sequence   MITSSFSEKCTSVINGAPSWAVFFLFDLLDYFLCIVFRFLDEVMEEKSESCH

Length  52

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9FN79,

Motif  1..52



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42857.cif

Structure  SPKB42857.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  6033.95554

Aliphatic index  86.15384615

Isoelectric point  4.079176538

Charge (pH=7)   -5.088259485

Topological polar surface area  2240.83

Aromaticity  0.173076923

Average rotatable bonds  3.75

Number of hydrogen bond donors  81

Number of hydrogen bond acceptors  81

X logP energy  -15.22163

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.