SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42848

Signal sequence   MFLSSRTIFVGLCFLFVLAPCFTRATT

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9FKC1,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42848.cif

Structure  SPKB42848.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3042.70864

Aliphatic index  101.1111111

Isoelectric point  8.834915637

Charge (pH=7)   1.874028245

Topological polar surface area  1056.31

Aromaticity  0.185185185

Average rotatable bonds  3.444444444

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  39

X logP energy  -6.41646

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.