SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42844

Signal sequence   MRSHHRHFSSYVSFILFLFLFFISFSSS

Length  28

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9FJ40,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42844.cif

Structure  SPKB42844.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3427.97354

Aliphatic index  80

Isoelectric point  11.14780643

Charge (pH=7)   2.269854535

Topological polar surface area  1240.93

Aromaticity  0.285714286

Average rotatable bonds  3.821428571

Number of hydrogen bond donors  47

Number of hydrogen bond acceptors  44

X logP energy  -7.86296

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.