SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42837

Signal sequence   MPTNNTPFLTIFLLFLGLLRFDSFPGLEA

Length  29

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9FIA1,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42837.cif

Structure  SPKB42837.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3285.89144

Aliphatic index  111.0344828

Isoelectric point  4.184407676

Charge (pH=7)   -0.999797405

Topological polar surface area  1155.35

Aromaticity  0.172413793

Average rotatable bonds  3.448275862

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  40

X logP energy  -5.40233

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.