SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42836

Signal sequence   MINSSSKKNLISTFSSMFTICIVMIFVTCYETFQQDGEPFPIRGPLTRITVKNNNDYLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDIDRAERDFYRCRNCTWNAKKDSLYGYSNLPQTVTWFFKWLK

Length  100

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9FI84,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42836.cif

Structure  SPKB42836.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  17750.18934

Aliphatic index  64.50331126

Isoelectric point  8.360067003

Charge (pH=7)   2.993599649

Topological polar surface area  7113.15

Aromaticity  0.165562914

Average rotatable bonds  3.867549669

Number of hydrogen bond donors  252

Number of hydrogen bond acceptors  243

X logP energy  -64.86758

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.