SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42827

Signal sequence   MGFSGIWLNLYVVFGSLMVFERMVVMVV

Length  28

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9FFC6,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42827.cif

Structure  SPKB42827.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3224.98934

Aliphatic index  128.2142857

Isoelectric point  6.403313374

Charge (pH=7)   -0.001094303

Topological polar surface area  1067.79

Aromaticity  0.178571429

Average rotatable bonds  3.678571429

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  39

X logP energy  -1.44063

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.