SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB42812

Signal sequence   MVSKITLLCFAITCDVLISMGTVQG

Length  25

Organism  Lettuce necrotic yellows virus (isolate 318) (LNYV)

UniProt ID  Q9DIC6,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB42812.cif

Structure  SPKB42812.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2644.25654

Aliphatic index  132.4

Isoelectric point  6.06420051

Charge (pH=7)   -0.125813682

Topological polar surface area  969.28

Aromaticity  0.04

Average rotatable bonds  3.52

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  38

X logP energy  -7.8345

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.